AMMI Stability Model 
[LSD Comparisons]
[Half Normal Plot] [Bi-Plot
1] [Bi Plot 2]
| Source
of Variations |
df |
Sum
of Squares |
Mean
Squares |
F
Ratio |
Probability |
|
| Trials |
77 |
27.664 |
0.359 |
1.466 |
0.181 |
|
|
Genotypes |
12 |
3.143 |
0.262 |
1.069 |
0.437 |
|
Environments |
5 |
9.815 |
1.963 |
8.009 |
0.000 |
*** |
|
G*E Interaction |
60 |
14.706 |
0.245 |
|
|
PCA I |
16 |
6.930 |
0.433 |
3.940 |
0.003 |
** |
|
PCA II |
14 |
3.277 |
0.234 |
2.129 |
0.066 |
|
|
PCA III |
12 |
2.521 |
0.210 |
1.911 |
0.104 |
| Residual |
18 |
1.979 |
0.110 |
1.000 |
0.500 |
| Comparison |
S.E.D. |
CD
5% |
CD
1% |
| Genotype Gi - Gj |
0.194 |
0.408 |
0.559 |
| Enviornment
Ei - Ej |
0.286 |
0.601 |
0.823 |
Fitting of Residual Sum of squares to check
model validity
| Genotype |
Env
1 |
Env
2 |
Env
3 |
Env
4 |
Env
5 |
Env
6 |
Var.
µ |
Var
Index |
PCA
I |
PCA
II |
PCA
III |
G*E ResSS |
| Cogg -2*LGG
-460 |
3.067 |
2.353 |
2.637 |
3.673 |
3.837 |
4.723 |
3.382 |
0.126 |
-0.520 |
0.579 |
0.505 |
0.036 |
| Cogg -2*LGG
-410 |
3.617 |
2.563 |
2.183 |
2.857 |
3.800 |
3.283 |
3.051 |
-0.205 |
-0.463 |
-0.014 |
-0.597 |
0.103 |
| Cogg -2*Cogg
- 32 |
3.620 |
2.750 |
3.027 |
2.947 |
3.197 |
3.697 |
3.206 |
-0.049 |
-0.017 |
-0.032 |
-0.094 |
0.542 |
| Cogg -2*ML
-332 - |
3.547 |
2.807 |
3.613 |
3.463 |
3.587 |
2.863 |
3.313 |
0.058 |
0.419 |
-0.068 |
-0.521 |
0.055 |
| Cogg -2*Pusa
-405 |
3.177 |
2.830 |
2.473 |
3.710 |
4.090 |
4.350 |
3.438 |
0.183 |
-0.618 |
0.347 |
0.147 |
0.028 |
| Cogg -2*RMG
-327 |
3.470 |
3.037 |
2.043 |
4.273 |
3.603 |
3.477 |
3.317 |
0.062 |
-0.538 |
-0.464 |
0.019 |
0.426 |
| Cogg -2*PDM
-489 |
3.467 |
2.780 |
2.383 |
3.750 |
2.830 |
3.540 |
3.125 |
-0.130 |
-0.210 |
-0.486 |
0.277 |
0.001 |
| ML -267*LGG
-460 |
3.520 |
2.463 |
2.720 |
3.393 |
3.517 |
3.653 |
3.211 |
-0.044 |
-0.183 |
0.046 |
-0.086 |
0.058 |
| ML -267*LGG
-410 |
3.453 |
3.167 |
3.120 |
3.920 |
3.067 |
3.633 |
3.393 |
0.138 |
0.066 |
-0.354 |
0.240 |
0.132 |
| ML -267*Cogg
- 32 |
3.457 |
2.400 |
4.237 |
4.023 |
2.510 |
3.740 |
3.394 |
0.139 |
0.820 |
-0.080 |
0.643 |
0.059 |
| ML -267*ML
-332 - |
3.417 |
1.770 |
2.790 |
3.197 |
2.947 |
2.673 |
2.799 |
-0.456 |
0.270 |
-0.130 |
-0.287 |
0.258 |
| ML -267*Pusa
-405 |
3.257 |
2.323 |
3.360 |
3.747 |
2.980 |
2.803 |
3.078 |
-0.177 |
0.491 |
-0.185 |
-0.072 |
0.095 |
| ML -267*RMG
-327 |
2.987 |
2.460 |
4.313 |
3.850 |
4.347 |
3.703 |
3.610 |
0.355 |
0.483 |
0.844 |
-0.174 |
0.185 |
| Env.
Mean |
3.389 |
2.593 |
2.992 |
3.600 |
3.408 |
3.549 |
If
the residual sum of squares as per fitted model is not matching with the
residual sum of squares of Anova, then the model is not multiplicative |
| Env.
Index |
0.133 |
-0.663 |
-0.263 |
0.345 |
0.153 |
0.294 |
| PCA
ScoresI |
-0.018 |
-0.282 |
1.364 |
0.099 |
-0.539 |
-0.625 |
| PCA
ScoresII |
-0.670 |
-0.567 |
0.407 |
-0.369 |
0.699 |
0.501 |
| PCA
ScoresIII |
-0.392 |
-0.105 |
-0.005 |
0.484 |
-0.761 |
0.780 |
| G*E
Res.SS |
0.470 |
0.360 |
0.034 |
0.768 |
0.120 |
0.227 |
1.979 |
Fitted Means as per AMMI
Model 
| Genotype |
Env
1 |
Env
2 |
Env
3 |
Env
4 |
Env
5 |
Env
6 |
Adj
Mean |
| Cogg -2*LGG -460 |
2.939 |
2.484 |
2.642 |
3.706 |
3.836 |
4.684 |
3.382 |
| Cogg -2*LGG -410 |
3.436 |
2.589 |
2.153 |
3.066 |
3.898 |
3.160 |
3.051 |
| Cogg -2*Cogg - 32 |
3.398 |
2.576 |
2.908 |
3.516 |
3.417 |
3.421 |
3.206 |
| Cogg -2*ML -332 - |
3.690 |
2.626 |
3.597 |
3.473 |
3.590 |
2.904 |
3.313 |
| Cogg -2*Pusa -405 |
3.293 |
2.738 |
2.472 |
3.665 |
4.056 |
4.407 |
3.438 |
| Cogg -2*RMG -327 |
3.764 |
3.067 |
2.132 |
3.790 |
3.422 |
3.729 |
3.317 |
| Cogg -2*PDM -489 |
3.479 |
2.768 |
2.376 |
3.763 |
2.841 |
3.523 |
3.125 |
| ML -267*LGG -460 |
3.351 |
2.583 |
2.718 |
3.480 |
3.560 |
3.575 |
3.211 |
| ML -267*LGG -410 |
3.669 |
2.888 |
3.075 |
3.992 |
3.081 |
3.656 |
3.393 |
| ML -267*Cogg - 32 |
3.314 |
2.478 |
4.214 |
4.161 |
2.560 |
3.638 |
3.394 |
| ML -267*ML -332 - |
3.127 |
2.164 |
2.853 |
3.080 |
2.934 |
2.635 |
2.799 |
| ML -267*Pusa -405 |
3.355 |
2.390 |
3.410 |
3.505 |
2.893 |
2.917 |
3.078 |
| ML -267*RMG -327 |
3.238 |
2.351 |
4.350 |
3.607 |
4.225 |
3.889 |
3.610 |
| Adj
Mean |
3.389 |
2.593 |
2.992 |
3.600 |
3.408 |
3.549 |
|
Standardised Residuals as per AMMI Model
| Genotype |
Env
1 |
Env
2 |
Env
3 |
Env
4 |
Env
5 |
Env
6 |
| Cogg -2*LGG -460 |
0.799 |
-0.815 |
-0.034 |
-0.201 |
0.006 |
0.244 |
| Cogg -2*LGG -410 |
1.126 |
-0.161 |
0.186 |
-1.307 |
-0.611 |
0.767 |
| Cogg -2*Cogg - 32 |
1.382 |
1.083 |
0.743 |
-3.552 |
-1.375 |
1.719 |
| Cogg -2*ML -332 - |
-0.892 |
1.125 |
0.101 |
-0.060 |
-0.019 |
-0.255 |
| Cogg -2*Pusa -405 |
-0.724 |
0.577 |
0.008 |
0.280 |
0.215 |
-0.356 |
| Cogg -2*RMG -327 |
-1.834 |
-0.192 |
-0.551 |
3.018 |
1.134 |
-1.575 |
| Cogg -2*PDM -489 |
-0.077 |
0.074 |
0.046 |
-0.080 |
-0.067 |
0.104 |
| ML -267*LGG -460 |
1.055 |
-0.747 |
0.014 |
-0.539 |
-0.270 |
0.487 |
| ML -267*LGG -410 |
-1.343 |
1.741 |
0.278 |
-0.446 |
-0.089 |
-0.141 |
| ML -267*Cogg - 32 |
0.887 |
-0.490 |
0.141 |
-0.861 |
-0.311 |
0.634 |
| ML -267*ML -332 - |
1.804 |
-2.459 |
-0.394 |
0.728 |
0.081 |
0.241 |
| ML -267*Pusa -405 |
-0.613 |
-0.415 |
-0.311 |
1.505 |
0.546 |
-0.711 |
| ML -267*RMG
-327 |
-1.569 |
0.678 |
-0.227 |
1.515 |
0.759 |
-1.156 |
![[LSD Comparisons]](ammi1.jpg){kind=link}
![[Half Normal Plot]](ammi2.jpg){kind=link}