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PATHOLOGY part1
INFECTIONS OF THE NERVOUS SYSTEM
SUPPURATIVE INFECTIONS
SUBDURAL EMPYEMA
SUPPURATIVE MENINGITIS
BRAIN ABSCESS
MYCOBACTERIAL INFECTIONS
TREPONEMAL INFECTIONS
FUNGAL INFECTIONS
CRYPTOCOCCOSIS
VIRAL DISEASES
HERPES SIMPLEX ENCEPHALITIS
CYTOMEGALOVIRUS ENCEPHALITIS
HIV INFECTIONS
PRION DISEASES
 Diagram of the brain, its coverings and spaces involved by CNS infectionshttp://www.akronchildrens.org/neuropathology/fig5-1.html
PATHOLOGY OF SEPTIC MENINGITIS
SEPTICAEMIA
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SEPTICAEMIC ENCEPHALOPATHY WITH OVERWHELMING INFECTION/TOXAEMIA
(especially with pneumo- & meningococcus)
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Endotoxic shock
Diffuse neuronal damage
Shwartzman reaction
Vasculopathy
Acute brain swelling
Hypoxia
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E D
A E
R A
L T
Y H
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after +/- 24 hrours
PURULENT EXUDATE
in ...
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subarachnoid space
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Leptomenigitis
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Vasculitis
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Infarcts
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ventricles
(characteristic & early in neonates)
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Choroid plexitis
Ventriculitis
Ependymitis
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empyema
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Acute hydrocephalus
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after +/- 72 hours
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Subependymal
venous thrombosis
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Periventricular
necrosis
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Cavaties & cysts
in survivors
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Commencing leptomeningeal
fibroblastic proliferation
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Blockage of
CSF pathways
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</CENTER
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Obstructive hydrocephalus
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, the brains
of AIDS patients may show various types of HIV-associated pathology,
with unknown or disputed pathogenesis:
1. Myelin palor
2. Vacuolar myelopathy
3. Vacuolar leucoencephalopathy
4. Lymphocytic meningitis
5. Diffuse poliodystrophy
6. Spongiform change
7. Cerebral vasculitis
 most bacterial infections spread to the brain by the bloodstream.
 Bacteria can penetrate into the brain from the environment if there is a break in the continuity of these protective layers.
Such a discontinuity may be due to congenital defects (encephalocele, meningomyelocele) or caused by trauma or a shunt.
Bacteria can also spread to the brain from infected adjacent air sinuses, the middle ear and the mastoids.
 They can reach the brain either directly through the bone, especially in areas where the bone plate is thin, or through veins (diploic veins, dural venous sinuses, intracerebral veins).
 The various protective layers may also help contain infections within certain spaces or planes.
Epidural abscess.
 An epidural space filled with adipose tissue exists normally around the spinal cord.
 A spinal epidural abscess arises when organisms from osteomyelitis and tuberculosis of the vertebral column spread to this space.
 There is no epidural space normally in the cranium.
 However, a cranial epidural abscess may develop when bacteria colonize a traumatic epidural hematoma or when infection from air sinuses extends in the plane between the dura and bone.
SUBDURAL ABSCESS (SUBDURAL EMPYEMA)
 Infection may spread to the subdural space from air sinuses or from the middle ear.
 The subdural space is traversed by bridging arteries and veins but has no vascular network of its own
 Therefore, antibiotics have no access to this space.
 Treatment of the subdural abscess consists of evacuation plus local instillation of antibiotic
 Epidural and subdural abscesses are collections of pus.
 If they are large enough, they compress the brain or spinal cord, resulting in loss of function, and increased intracranial pressure.
 Locally, neutrophils destroy tissues with their enzymes.
 This damage is followed by formation of vaxcula inflammatory tissue and then a fibrous scar.
 Histologically, acute subdural empyema shows mainly a layer of neutrophils overlying the arachnoid membrane.
 The inflammatory cells may infiltrate the arachnoid membrane and extend into the subarachnoid space.
INFECTIVE DISORDERS
 Meningitis
 Encephalitis
 Other infective conditions
Acute Pyogenic Leptomeningitis:
 An acute inflammation of the leptomeninges and subarachnoid space; usually the infection is diffuse, since the CSF is a good culture medium & rapidly disseminates bacteria throughout the subarachnoid space.
 The most common organism in neonates is E. Coli; in infants & children, H. old, S. Pneumoniae.
 The most common routes of infection are hematogenous or direct extension from infection of an adjacent structure (mastoiditis, otitis media, sinusitis).
 The CSF is cloudy and contains many neutrophils; protein is increased and glucose is reduced;
 Gram stain may demonstrate the causative organism (Gram negative diplococci = meningococci).
 The meninges are opaque due to a covering of exudate , which often extends along the arachnoidal vessels
 This exudate tends to concentrate over the cerebral hemispheres in S. Pneumoniae meningitis; it tends to be basal in location in H. Influenzae infection. Neutrophils are present in the subarachnoid/Virchow - Robin spaces and sometimes fill these spaces.
 Secondary invasion of the brain produces a meningoencephalitis. In fulminant cases, there may be involvement of the leptomeningeal veins - which may develop a septic thrombophlebitis with secondary venous infarction of the brain.
 Organization of the subarachnoid exudate can produce adhesions (adhesive arachnoiditis) - obstructing the flow of CSF and producing a communicating hydrocephalus
1. Meningitis
Meningitis refers to an inflammatory process in the CSF/leptomeninges. It may be classified as follows:
 acute pyogenic (bacterial)
 aseptic (viral)
 chronic (bacterial or fungal)
 Chronic meningitis occurs when low-grade infections affect the meninges.
 Often these are basal and cause thickening and fibrosis of the leptomeninges.
 Involvement of cranial nerves and vessels in the inflammatory/fibrotic process may result in cranial nerve palsies or infarcts, or the fibrosis may result in hydrocephalus
 Suppurative meningitis is the infection of the arachnoid membrane, subarachnoid space, and cerebrospinal fluid by bacteria.
 The subarachnoid space is bounded externally by the arachnoid membrane and internally by the pia and dips into the brain along blood vessels in the perivascular ( Virchow-Robin) spaces.
It extends from the optic chiasm to the cauda equina and surrounds the brain and spinal cord completely.
 Meningitis may have a focal origin (sinusitis, mastoiditis, brain abscess, penetrating injury, congenital defect), but more commonly results from hematogenous dissemination.
 The most common organisms of bacterial meningitis in children and adults are
streptococcus pneumoniae and Neisseria meningitidis.
Hemophilus influenzae, is very infrequent now in young children thanks to vaccination.
In newborns, the most common organisms are Eschericia coli and beta hemolytic streptococcus group B.
 Babies are frequently infected during passage through the birth canal.
 These organisms colonize the nasopharynx.
 From there, they get into the blood stream and are spilled into the CSF through the leaky capillaries of the choroid plexus.
 The CSF is an ideal medium for the spread of bacteria because it provides enough nutrients for their multiplication and has no phagocytic cells, immunoglobulins or complement.
 Initially, bacteria multiply uninhibited and can be identified in smears, cultures, or by ELISA detection of their antigens before there is any inflammation.
 When bacteria die, lipids and oligosaccharides, including endotoxin, are released from their walls.
 Some of these components cause vascular injury and shock.
 Symptoms of sepsis may develop and even death from gram-negative shock may occur before any inflammation appears.
Bacterial cell wall components also induce monocytes, astrocytes and microglial cells to produce interleukin-1 (IL-1) and tumor necrosis factor. These cytokines attract circulating neutrophils and monocytes into the CSF
 A spinal tap at this point shows hundreds of neutrophils, elevated protein (from dying neutrophils) and low glucose (because it is consumed by the bacteria and inflammatory cells).
 The CSF may change into pus.
 This purulent exudate covers the convexities of the brain and settles along the base of the brain, around cranial nerves and the openings of the fourth ventricle
 Bacterial meningitis. Purulent exudate along the base of the brain
 In addition to fever and other symptoms of generalized infection, the patient with meningitis has severe headache and a stiff neck.
 The inflamed spinal structures are sensitive to stretch, and pain can be elicited by maneuvers that stretch the spine, such as bending the leg with an outstretched knee or bending the neck. As the disease progresses, confusion, coma and seizures develop.
 These complications are due to increased intracranial pressure and to a toxic metabolic encephalopathy.
 The latter is probably due to unknown diffusible substances (perhaps cytokines) that have a neurotoxic action.
 Increased intracranial pressure is due to cerebral edema and increased CSF volume.
 Vascular damage induced by IL-1 and TNF allows fluid to leak into the interstitial space and proteins to leak into the CSF.
 Polyunsaturated fatty acids released by dying neutrophils can also increase vascular permeability. Neutrophils invade cranial and spinal roots and blood vessels in the subarachnoid space.
 Lysosomal enzymes released by dying neutrophils eat away at these tissues, causing severe chemical injury.
Vasculitis induces thrombosis
 Thus, meningitis can cause cranial nerve deficits and ischemic infarction of brain.
 In addition, the thick fibrinopurulent exudate in the subarachnoid space organizes into fibrous tissue that blocks the exits of the fourth ventricle and hinders CSF circulation.
 This causes hydrocephalus
Hydrocephalus secondary to meningitis.
 These complications take time to develop and may appear after the inflammation has subsided.
 They may be prevented by prompt treatment.
 The glia limitans, a thick tight mesh of astrocytic processes, joined by dense junctions and covered by basement membrane, is impenetrable to bacteria and neutrophils.
 Undamaged, it provides an effective barrier that prevents meningitis from spreading into brain tissue.
 Thus, brain abscess as a complication of meningitis is rare.
 Brain dysfunction and injury are caused more often by increased intracranial pressure, HIE due to shock, and from ischemic infarcts due to vasculitis.
 Brain damage from these complications may be devastating or fatal, especially in newborn babies in whom the brain can literally melt away.
. Severe destruction of the brain in a baby with Group B Streptococcal meningitis
 Brain damage in meningitis is, for the most part, due to host responses that cause inflammation.
 These responses have a protective purpose (to eliminate bacteria) but are excessive and indiscriminate.
 They damage everything in their way, mostly host tissues.
 Modulating these reactions (in addition to killing bacteria) can reduce the complications of meningitis
2. Abscess
 Cerebral abscesses were traditionally associated with a high mortality but this has improved significantly with current treatment regimens.
 the brain abscesses act as a tumor in the brain with the same symptomatology as location and headache the only difference will be the fever associated with.
 Brain abscess is a newly formed cavity within the brain filled with pus.
 Infection spreads from adjacent air sinuses or the middle ear, or via the blood stream from the lungs (bronchiectasis, lung abscess), or from the heart (bacterial endocarditis).
 The location of the abscess corresponds to its source.
 Frontal sinusitis causes frontal lobe abscess and mastoiditis causes temporal lobe abscess.
 Hematogenous abscesses are often multiple.
 The bacterial flora of brain abscess depends on the source of the infection.
 In the case of sinusitis and otitis, it is usually mixed, including anaerobes.
 Bacteremia alone does not cause brain abscess.
 Some tissue damage, probably a small ischemic lesion, is required to start the process.
 Bacteria spreading around this necrotic nidus cause brain necrosis and acute inflammation (cerebritis).
 Cerebritis. Brain necrosis, acute inflammation and bacteria. This will evolve into an abscess
 The necrotic center cavitates, while at the periphery, a vascular zone of brain tissue with macrophages, mononuclear cells and reactive astrocytes contains the infection.
 In 4-5 weeks, collagen (derived from vascular cells) laid down in this reactive zone forms a thick capsule that walls off the infection.
 Increased vascular permeability in the inflamed tissue causes cerebral edema.
 Vascular leakage accounts also for the "ring enhancing" pattern after contrast injection which gives abscess its characteristic radiological image (necrotic tumors may have a similar appearance).
 Systemic antibiotics are effective in the phase of cerebritis.
 Once a capsule develops, it is a barrier to antibiotics.
 Thus, the treatment of chronic abscess needs drainage or surgical excision in addition to local and systemic antibiotics.
 Brain abscess causes loss of neurological function due to destruction of brain tissue.
 More important, it causes increased intracranial pressure.
 Its mass effect is due to the collection of pus and to cerebral edema around the abscess.
 Since the infection is contained within brain tissue, the CSF usually shows only a few mononuclear cells with normal protein and glucose.
3. Encephalitis
 Primary infection of the brain is not common.
Viral diseases are the usual cause, but bacteria (eg syphilis), fungi (eg cryptococcus) and parasites (eg toxoplasmosis in AIDS patients) can also be seen.
 A number of different patterns can be seen, depending on the causative agent.
 For example, Herpes simplex typically causes necrosis of neurones with a predilection for the temporal lobes.
 Other viruses such as the arthropod-borne viruses (in Australia an example is Murray Valley encephalitis) may be more diffuse, or in some cases there may be striking tropism for one particular cell type.
 An example of this is poliovirus, which affects the motor neurones of the anterior horn in the spinal cord, causing paralysis. In most cases the macroscopic appearance of encephalitis is not diagnostic
 Spongiform encephalopathy is a special form of encephalitis that is quite topical because of mad cow disease in the United Kingdom.
 Spongiform encephalopathy in humans was characterised in cannibals from the Niuginian highlands, who showed rapidly developing dementia and sponge-like vacuoles in the grey matter of their brains.
 It was called kuru and was found to be due to the consumption of human brains.
 Subsequntly, it was recognised that this was a similar disease to another one in humans (Creutzfeldt-Jakob disease), sheep (scrapie), and cows (bovine spongiform encephalopathy -BSE- or mad cow disease).
 A rare inherited form also occurs in humans.
 The unusual nature of the agent was recognised early.
 Although initially thought to be due to a "slow virus", the agent had characteristics of a protein; thus proteinaceous infective agent or prion. It appears that the prion protein is an abnormally folded form of a native cerebral cellular protein, and causes disease by gradually altering the conformation of the native protein so it forms sheets
note that the encephalitis can be infectious or not infectious.
Pathologic Characteristics of Viral Encephalitis
 Parenchymal and perivascular mononuclear cell infiltrates(lymphocytes, plasma cells, and macrophages) & mononuclear cells in the CSF.
 Microglial nodules which form around degenerate/necrotic neurons (Neuronophagia). Also, many microglia have elongated nuclei(rod cells).
 Inclusion Bodies: These are specific "markers" for viral infection
 Nuclear Inclusions (Cowdry Type A): H. simplex, Varicella-Zoster, Cytomegalovirus , Subacute Sclerosing Panencephalitis.
 Cytoplasmic Inclusions: Negri body (rabies)
 Tropism - many viruses primarily infect specific subpopulations of cells;
 Herpes Zoster - dorsal root ganglion cells
 Poliomyelitis virus - anterior horn motor neurons
 Papovavirus - oligodendroglia
 Rabies virus - pyramidal neurons of the hippocampus & Purkinje cells
 Herpes Simplex - inferior frontal and temporal lobes
 Cytomegalovirus - ependymal cells and microglia
 Latency- Herpes Simplex and Varicella-Zoster remain latent in host neurons, only to be reactivated months or years after the initial infection.
Subacute Sclerosing Panencephalitis (SSPE)
 Occurs in children or young adults, and is always preceeded by a history of measles, or, rarely, measles vaccination or other viral infection (e.g. mumps)- usually in the distant past. It represents a persistent infection by an bodies are found in neurons, oligodendroglia, and astrocytes; there is a dense fibrillary gliosis(note perivascular mononuclear cells).
 Clinically, there are personality changes,involuntary movements, and progressive neurologic deterioration over 2 - 3 years.
Progressive Multifocal Leukoencephalopathy (PML)
 A Papovavirus infection of oligodendroglial cells.
 Because these cells produce myelin, this disease presents with demyelination.
 It is associated with immunosuppressed hosts - including advanced hematologic malignancy and AIDS.
 There are multiple poorly demarcated areas of demyelination present within the cerebral, cerebellar, and spinal white matter.
 At the margins of these areas, the oligodendroglia have enlarged nuclei
 , which may contain violet/eosinophillic intranuclear inclusions.
 Present within the areas of demyelination are bizarre giant astrocytes & foamy macrophages containing myelin break-down products.
Spongiform Encephalopathies
 These are a group of diseases caused by transmissible agents called prions (proteinaceous infectious particles) which are not fully characterized.
Microscopically they all show a characteristic spongiform vacuolation in the gray matter (cortex, basal ganglia, cerebellum, and spinal cord) with neuronal loss and astrocytosis.
 The spongiform vacuoles are in the processes of neurons and glia.
 There are no inflammatory cells.
 Creutzfeld-Jakob Disease - a rare disease, characterized by rapidly progressive dementia and death in 2-3 years. Most cases are sporadic. However, transmission by corneal transplants & contaminated Growth Hormone & autopsy's has been documented and 10-15% of cases are inherited. "New Variant" CJD is thought to be caused by the same agent that produces bovine spongiform encephalopathy (mad cow disease).
 Kuru is limited to the Fore tribe of New Guinea, where it is transmitted by cannibalism. It affects primarily the cerebellum, and presents with cerebellar ataxia and a "shivering" tremor. It progresses to complete motor incompacity.
 Scrapie is a slow virus disease of goats and sheep.
 Fatal familial insomnia.
Opportunistic CNS Infections Associated with AIDS
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Viral Infections:
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Autopsy Incidence
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Subacute (HIV) Encephalitis
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28%
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CMV Encephalitis
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26%
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Nonspecific Encephalitis
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17%
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Progressive Multifocal
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Leukoencephalopathy
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2%
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Varicella-Zoster Encephalitis
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2%
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Herpes Simplex Encephalitis
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2%
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Fungal Infections:
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Aspergillus
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1%
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Candida
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1%
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Cryptococcus
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3%
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Histoplasmosis
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1%
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Parasitic:
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Toxoplasmosis
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10%
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Neoplasms:
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Primary CNS Lymphoma
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6%
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Other:
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Vacuolar Myelopathy
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30%
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proof of viral infection [inclusion bodies] microglial nodules cytomegalovirus
4. Parasitic infections
 Hydatid disease
 cysticercosis
 malaria
MYCOBACTERIAL INFECTIONS
 Mycobacterial infections, always prevalent in developing countries, are now reappearing in the United States and Europe, especially in immunodeficient persons.
 During hematogenous dissemination of tuberculosis, small caseating lesions (tubercles) develop in the meninges and in brain tissue.
 Mycobacteria can survive in these lesions for a long time.
 When tubercles rupture, mycobacteria are discharged into the CSF causing tuberculous meningitis
 This may happen in the course of disseminated miliary tuberculosis, or sometimes years later.
 The focus of initial infection in the lungs may be undetected.
 In some cases, tuberculous meningitis has a fulminant presentation, like bacterial meningitis.
 In other cases, it presents insidiously and progresses slowly over weeks or months, causing headache, confusion and cranial nerve deficits.
 Infection of the CSF causes initially acute inflammation similar to bacterial meningitis.
 Mycobacteria are not eliminated because they have components in their cell walls that enable them to survive in macrophages.
 Thus, the organisms are not eliminated.
 Two to three weeks after the onset of the infection, sooner in sensitized hosts, a cell-mediated immune reaction develops.
 This enhances intracellular killing of mycobacteria by macrophages and eventually leads to necrosis of infected tissue.
 Necrotic tissue is yellowish and has a cheesy consistency, hence caseous (L. caseus. cheese) necrosis.
 The histological findings in tuberculous meningitis are the same as those of mycobacterial infections elsewhere, namely epithelioid cell granulomas with Langhans giant cells and lymphocytic infiltrates.
 Epithelioid cells are macrophages engaged in mycobacterial killing.
 They aggregate in clusters (granulomas) or fuse forming giant cells.
 These changes involve the arachnoid membrane and subarachnoid space diffusely. Acid fast organisms can be demonstrated in the granulomas.
 Mycobacteria produce no exotoxins.
 The inflammatory reaction gradually kills the organisms. However, the destructive force of inflammation causes severe damage to vessels, nerves, and the arachnoid membrane with complications (vasculitis, cerebral infarction, hydrocephalus, nerve damage) even more serious than those of suppurative meningitis.
 Also, unlike suppurative meningitis in which the exudate is usually confined to the subarachnoid space, epithelioid cell granulomas destroy the pia and the surface of the brain.
 The CSF in tuberculous meningitis shows pleocytosis with a predominance of mononuclear cells, high protein and low glucose.
 Tuberculous infection of the brain sometimes results in formation of a mass (tuberculoma) that consists of caseous necrotic material surrounded by epithelioid cell granulomas and mononuclear cells.
Tuberculoma.
 Rupture of the tuberculoma and release of mycobacteria into the subarachnoid space cause meningitis.
 Tuberculosis characteristically produces a chronic basilar meningitis
 The subarachnoid space is distended with an exuberant fibrous exudate, which collects at the base of the brain and extends into the lateral sulci.
 Microscopically, there is an exudate composed of plasma cells, lymphocytes, macrophages, and necrotizing granulomas:
 Ziehl-Nielson stains reveal acid fast bacilli: 
 Organization is the rule, and a resultant adhesive arachnoiditis often produces a communicating hydrocephalus
 . Subarachnoid vessels develop an obliterative arteritis - with secondary cerebral/spinal infarction.
 There may be secondary entrapment of cranial nerves passing through the affected subarachnoid space.
 Uncommonly, a "tuberculoma" forms within the brain and produces symptoms of a space-occupying lesion similiar to a brain tumor.
 The CSF contains increased numbers of mononuclear cells, high protein, and slightly decreased glucose
 tuberculoma
TREPONEMAL INFECTIONS
 Tertiary syphilis produces protean neurological manifestations caused by meningovascular and parenchymal lesions.
 The meningovascular lesions are a lymphoplasmacytic meningitis and intimal thickening of small and medium-size leptomeningeal and parenchymal arteries (endarteritis obliterans- Heubner arteritis).
 The parenchymal lesions are tabes dorsalis (rot of the spinal cord), characterized by inflammation and degeneration of dorsal roots and posterior columns, and general paresis of the insane (dementia paralytica), an encephalitis due to invasion of the brain by spirochetes.
 In addition, syphilis can cause gummas in the brain. A gumma (L gummi gum) is a rubberry necrotic-inflammatory mass containing spirochetes, that acts like a space-occupying lesion. Syphilis can also cause an acute meningitis during its secondary stage.
Lyme disease is caused by the tick-borne spirochete Borrelia burgdorferi.
 In its second and third stages, it can cause meningitis, radiculitis, neuropathy and encephalitis leading to ataxia, paralysis, dementia and other neurological manifestations.
 The CSF shows mononuclear pleocytosis and mild protein elevation.
 The pathology is not well studied.
 Presumably, there are lymphoplasmacytic infiltrates and vasculitis in the meninges and brain, similar to changes that have been observed in other tissues.
FUNGAL INFECTIONS OF THE NERVOUS SYSTEM
 The most common CNS mycoses are, in order of frequency, Candidiasis, Aspergillosis and Cryptococcosis.
 They are seen mainly in patients with AIDS and other immunosuppressed states.
 Candida and Aspergillus are usually nosocomial infections and involve the brain in the course of generalized infection.
Candida consists of budding yeasts and hyphae.
 It causes meningitis, multiple microabsesses or extensive brain necrosis.
. Extensive brain necrosis in Candida meningoencephalitis
Aspergillus and the related soil fungus Mucor (Rhizopus)
 are branching hyphae.
 They have the tendency to invade blood vessels and cause thrombosis with cerebral infarction or vascular rupture with cerebral hemorrhage.
 Mucor is especially common in patients with diabetic ketoacidosis.
 It infects the nasal mucosa from where is spreads to the brain.
MUCOR may infect the sinuses of diabetic patients with ketoacidosis - with direct invasion of the orbits and CNS - producing rhinocerebral mucormycosis (note broad non-septate hyphae).
Mucor has a propensity for vascular invasion with secondary thrombosis and hemorrhagic cerebral infarction.
Cryptococcus,
 which is a worldwide fungus, present in bird droppings, vegetables and soil, speads to the brain from the lungs and often causes meningitis without involving other organs.
 Unlike Candida and Aspergillus, it is most often community acquired.
 It may affect healthy individuals, but is particularly common in immunodeficient patients.
 Cryptococcus is a 6-7 microns round or oval yeast surrounded by a thick gelatinous capsule
Cryptococci in mucinous material.
 It grows extensively in the subarachnoid space and perivascular spaces which become cystically distended to the point that brain sections look like Swiss cheese
Cryptococcus meningitis. Massive numbers of organisms cause distention of perivascular spaces which imparts a Swiss cheese appearance to the brain
 In immunosuppressed individuals, inflammation is absent or mild.
 In immunocompetent hosts, cryptococcus elicits a cell-mediated immune reaction with lymphocytes and epithelioid cell granulomas.
 Cryptococcus meningitis has an insidious onset and may last from weeks to years. I
 t can cause hydrocephalus, dementia and focal neurologic deficits.
 The CSF in cryptococcosis shows mononuclear pleocytosis, elevated protein and low glucose, similar to tuberculous meningitis.
 Yeasts can be identified by microscopy of the CSF and their antigens can be detected by latex agglutination.
CRYPTOCOCCUS NEOFORMANS often produces a chronic basilar meningitis Mononuclear inflammatory cells, foreign body giant cells, and the characteristic yeasts (mucicarmine- positive) are present within the subarachnoid and Virchow - Robin spaces, and produce the characteristic "soap bubble" appearance . India Ink stains of the CSF often demonstrate the encapsulated yeasts, but this test is not performed on tissue sections.
VIRAL DISEASES OF THE NERVOUS SYSTEM [see also above]
 Viruses enter the body via
 the respiratory tract (mumps, measles),
 gastrointestinal tract (enteroviruses),
 by inoculation from insect bites (arthropod-borne viruses)
 and from animal bites (rabies).
 Most viruses reach the CNS via the bloodstream.
 Some viruses including herpes simplex virus(HSV), varicella-zoster virus (VZV), and rabies may also travel to the CNS along nerves.
 Viruses are obligate intracellular organisms.
 They use cellular machinery for their replication and kill or damage the cells that they infect. Additional brain damage is caused by the cell-mediated immune reaction that they elicit.
 The cascade of events that begins with activation of T-lymphocytes by viruses includes the release of potent cytokines (INF-gamma, IL-2, TNF, lymphotoxin) and mobilization of macrophages that not only attack the viruses but assault the host causing severe vascular and tissue injury.
 Viral infection of the arachnoid membrane and CSF causes headache, stiff neck and mononuclear CSF pleocytosis with normal protein and glucose.
 This syndrome is called aseptic meningitis, because no bacterial organisms are isolated.
 The most common agents causing aseptic meningitis are enteroviruses.
 Involvement of neurons and glial cells by viruses (viral encephalitis) impairs neurological function and causes
 seizures,
 focal neurologic deficits and
 coma.
 Encephalitis is usually accompanied by viral meningitis whereas aseptic meningitis may occur alone.
 The brain is usually involved in the course of generalized viral infection.
 In babies (and with some viruses in adults also) there is often severe involvement of other organs.
 In many cases, however, damage of other organs is mild or absent. Some viruses have a predilection for certain groups of neurons.
 For instance, poliomyelitis attacks anterior horn cells and varicella-zoster involves sensory ganglion cells. Most viruses have no such special tropism.
 Histologically, viral infections show inflammation and brain damage.
 At an early phase, inflammation includes neutrophils but later it consists primarily of lymphocytes and macrophages.
 These cells infiltrate the arachnoid membrane and brain tissue diffusely but are more concentrated around blood vessels
 Activation of microglia (indigenous macrophages of the brain, like histiocytes of other tissues) causes these cells to proliferate diffusely or to form small clusters, microglial nodules[SEE PICTURE ABOVE]
which are a histological clue of viral infection.
 Tissue damage ranges from individual cell to diffuse brain necrosis involving large contiguous areas. Certain viruses cause intranuclear andcytoplasmic inclusions
 These are eosinophilic masses consisting of packed viral particles and products of their replication
HSV encephalitis. Viral particles in intranuclear inclusions
 Viruses that cause inclusions are
herpes simplex,
cytomegalovirus,
varicella-zoster,
papovaviruses and
measles.
 When the inflammatory and immune reactions of viral encephalitis subside, the lesions heal with glial scar formation.
 However, lost neurons do not regenerate.
 So, in the aftermath of viral infections, patients are often left with severe permanent neurological deficits (seizures, dementia, paralysis).
HERPES SIMPLEX ENCEPHALITIS
Adult and pediatric (post-neonatal) HSV encephalitis
 is caused by HSV type I.
 It is the most common year-round viral encephalitis.
 Most people become primarily infected with HSV in their teens or twenties. HSV type I is transmitted by the saliva.
 The initial infection causes a stomatitis.
 Following this, the virus remains latent in the trigeminal ganglion.
 From this location, reactivated virus can spread either to the skin, along the branches of the trigeminal nerve causing sores on the lips (herpes labialis), or to the brain, infecting the meninges of the anterior and middle cranial fossae.
 From the meninges, the virus extends to the adjacent brain where it affects the temporal and inferior frontal lobes first and more severely and then spreads to the rest of the brain.
 Adult HSV encephalitis is limited to the brain.
 Its symptoms are fever, confusion, coma and seizures.
In addition, because of the involvement of the frontal and temporal lobes, patients often display bizarre behaviour, personality changes, anosmia and gustatory hallucinations.
 Survivors may have Korsakoff amnesia, dementia and seizures.
 Grossly, the brain in advanced HSV encephalitis shows diffuse softening and edema, accentuated by hemorrhagic necrosis of the inferior frontal and temporal lobes.
 Microscopical exam in the acute phase shows meningeal and perivascular mononuclear cells,
Adult HSV encephalitis. Perivascular mononuclear cells and diffuse macrophages
increased microglia and intranuclear inclusions.
 Without treatment, extensive necrosis, macrophage reaction and neovascularization develop.
 The end-stage is brain atrophy and gliosis.
 The degree of brain destruction (especially in the frontal and temporal lobes) and the inflammatory and reactive changes are more severe than any other viral encephalitis and can be detected by imaging.
 The CSF shows pleocytosis (early neutrophils, late lymphocytes) and elevated protein, depending on the degree of brain necrosis.
 Glucose is normal. HSV is hard to isolate from CSF. In the past, the diagnosis of HSV encephalitis required brain biopsy with fluorescent antibody staining using anti-HSV antibodies, microscopic study (to detect inclusions and viral particles) and viral culture.
 Now, HSV can be detected in CSF by polymerase chain reaction ( PCR).
 When a patient presents with fever, obtundation, seizures and abnormal CSF, it is preferable to treat with antiviral agents (and antibiotics) rather than defer treatment until the diagnosis is established. In some cases, this approach will result in unnecessary use of antiviral agents.
 However, in patients with HSV encephalitis, prompt treatment will save lives and prevent permanent neurologic deficits.
Neonatal HSV infection.
 Babies contract HSV type II (herpes genitalis) during passage through the birth canal and occasionally transplacentally.
 Less frequently, congenital HSV infection is due to HSV type I.
 Many babies acquire the infection after birth, in the newborn nursery or at home. Neonatal herpes is often a generalized infection involving most severely the brain, liver and adrenal glands.
 It causes a diffuse necrotizing encephalitis, without predilection for the frontal and temporal lobes
CYTOMEGALOVIRUS ENCEPHALITIS
 Cytomegelovirus (CMV) encephalitis in adults is rare and usually occurs as part of a generalized CMV infection in immunocompromised patients.
 Infected neurons and glial cells enlarge and develop cytoplasmic and intranuclear inclusions
CMV encephalitis. Intranuclear and cytoplasmic inclusions and enlargement of infected neurons and glial cells.
 Microglial nodules, lymphocytes, and macrophages infiltrate the lesions.
 Heavily infected areas become necrotic.
 The lesions have a predilection for the walls of the ventricles.
 A pregnant mother who carries CMV may transmit the virus to the fetus across the placenta, causing a generalized fetal CMV infection.
 This infection may develop at any stage during pregnancy and may continue after delivery.
 Infants with congenital CMV infection have variable involvement of the brain and other organs. Prenatal CMV infection often causes necrosis of brain tissue, especially of the walls of the lateral ventricles.
Prenatal CMV encephalitis. Periventricular necrosis and calcification
 Necrotic areas calcify and can be detected by imaging.
 Infection before mid-gestation may derange the process of neuronal migration, causing microcephaly and cortical dysplasia.
HIV INFECTIONS [see table above]
Human immunodeficiency virus (HIV)infects and destroys selectively T4 lymphocytes, causing immune deficiency.
 Consequently, AIDS patients are susceptible to opportunistic infections.
 The most common of these are CNS toxoplasmosis, cryptococcosis and other mycoses, CMV encephalitis and papovavirus infections.
 Historically, opportunistic infections attracted attention to AIDS long before it became known that HIV can also directly involve the brain.
AIDS patients develop cerebral or other extranodal B-cell lymphomas due to loss of the surveillance function of T-cells. HIV also infects the nervous system directly, causing aseptic meningitis, encephalitis, leukoencephalopathy, myelopathy, neuropathy and myopathy.
 The most common of these direct effects, HIV encephalitis (AIDS-dementia complex), causes progressive memory loss, intellectual deterioration, behavioral changes, and motor deficits.
 HIV has been detected in the brains of patients with HIV encephalopathy by DNA analysis and HIV-specific immunoglobulin is produced intrathecally.
 Pathologically, HIV encephalopathy is characterized by diffuse myelin damage (spongy myelinopathy, gliosis), neuron loss, vascular damage, microglial nodules, lymphocytic infiltrates and multinucleated giant cells.
HIV encephalitis. Multinucleated giant cell
 These giant cells are the hallmark of HIV encephalitis.
 The inflammatory reaction in HIV encephalitis is mild compared to other CNS infections and does not fully explain the clinical manifestations.
 HIV can be transmitted from the infected mother to the fetus, resulting in congenital HIV infection.
 The lesions of congenital HIV encephalitis are more severe than those of the adult form and may result in microcephaly.
 One additional distinctive feature of congenital AIDS is basal ganglia calcification.
 Despite intensive investigation, the pathogenesis of HIV encephalitis remains obscure.
 The virus is presumably brought into the subarachnoid and perivascular spaces by infected T4 cells and monocytes.
 The next step is penetration of HIV into brain parenchyma.
 This may be caused by migration of infected cells into brain tissue or phagocytosis of such cells by microglia.
 In addition, microglial cells have T4 receptors and can be infected by HIV.
 Once the virus enters into brain tissue, it resides in macrophages and microglia which fuse, forming multinucleated giant cells.
 Fusion is caused by an action of the HIV envelope glycoprotein and plays a part in killing of infected cells. HIV has been demonstrated by immunohistochemistry in neurons and astrocytes but the significance of this observation is not clear.
 There is no evidence of a productive infection of either neurons or glial cells.
 Therefore, neuronal and white matter damage is not a direct effect of HIV. It is probably caused by cytokines such as TNF produced by activated microglial cells, viral products and other types of HIV-brain interactions.
 HIV envelope glycoprotein gp 120 activates NMDA receptors and induces a cascade of excitotoxic events. The pathology of HIV myelopathy resembles subacute combined degeneration.
 This suggests that metabolic changes induced by HIV may contribute to the damage of myelin.
PRION DISEASES (TRANSMISSIBLE SPONGIFORM ENCEPHALOPATHIES)
Prions (pronounced pree-ons, an acronym for proteinaceous infectious particles) are abnormal isoforms of a neuronal membrane glycoprotein.
 The function of the normal protein (PrP C) is not known.
 Normally it occurs as an alpha-helix.
 A change in its folding pattern into a beta sheet (PrP Sc) presumably alters its function, resulting in neuron degeneration and loss.
 It also makes the protein resistant to the action of proteases and causes
 it to precipitate as insoluble amyloid. Such a change in conformation from PrP C to PrP Sc may come about as a result of mutations of the PrP C gene (on chromosome 20) that alter its amino acid sequence.
 Also, when extrinsic abnormal prions are introduced into the body, they interact with normal indigenous prions and, acting as templates, cause normal prions to change their conformation into abnormal.
 This conversion apparently takes place on a large scale.
 The transmissibility of prion diseases has been proven by animal experiments.
 Natural transmission from animal to animal (especially in sheep) has been known for many years.
 In a few instances, also, prion diseases have been accidentally transmitted from human to human by transplantation of tissues (lens) or injection of pituitary extracts from patients with prion diseases. In 1996, transmission of bovine spongiform encephalopathy to humans was reported in England.
The human prion diseases are:
Creutzfeldt-Jakob disease, sporadic and familial (see below).
Kuru. A now-extinct disease of New Guinea natives, transmitted by eating the brains of dead persons who had the disease.
Gerstmann-Straussler syndrome. An autosomal dominant form of ataxia.
Fatal familial insomnia. An autosomal dominant sleep disorder with pathological lesions in the thalamus.
New variant of Creutzfeldt-Jakob disease. Cases of CJD reported in the United Kingdom, suspected of being transmitted by consumption of contaminated meat.
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The most common animal prion diseases are:
Scrapie. An important disease of sheep that has been known for over 100 years. The term derives from the fact that sick animals rub against rocks or other hard surfaces, destroying their fleeces. The discovery of transmissibility and other important aspects of the biology of prion diseases was based on knowledge of scrapie. The suffix sc in PrPsc is derived from scrapie.
Bovine spongiform encephalopathy (BSE)-mad cow disease.
Transmissible mink encephalopathy.
Wasting disease of deer and elk.
Prion diseases have also been reported in several other domesticated and wild animal species and can cross from one species to another. Experimental transmission to primates and guinea pigs has played an important role in elucidating their pathogenesis.
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 Pathology, in prion diseases, develops only in the brain. No other organ is affected.
 Early on, neurons develop intracytoplasmic vacuoles.
 As the disease progresses, vacuolization becomes more pronounced and, microscopically, the cortical neuropil develops a spongy appearance, hence the term spongiform encephalopathy.
 Advanced cases show neuron loss, gliosis, and brain atrophy.
 Cerebellar atrophy is usually severe.
 Unlike most cerebellar degenerations, there is more pronounced loss of granular neurons than Purkinje cells
Creutzfeldt-Jacob disease. Cerebellar degeneration. Loss of granular neurons with relative preservation of Purkinje cells.
 There is no inflammation.
 The CSF is normal.
 The changes are confined to the gray matter (the primary pathology involves the neuronal body).
 In some cases, prion proteins precipitate as amyloid plaques.
Creutzfeldt-Jakob disease (CJD) is the most common prion disease of humans.
It affects middle aged or old persons and causes
 dementia,
 myoclonus,
 ataxia and
 other neurological abnormalities.
 The EEG shows diffuse slowing or a characteristic periodic burst suppression pattern.
 CJD is inexorably progressive and fatal within 1 to 2 years.
 A definitive diagnosis can only be made by a brain biopsy or autopsy showing the characteristic spongy change.
 Abnormal prions can be detected in brain tissue extracts by ELISA and in tissue sections by immunohistochemistry.
 A protein called 14-3-3 has been recently reported to be elevated in the CSF of patients with CJD.
 This protein was also found in a few patients with cerebral infarcts, HSV encephalitis and other conditions that can be distinguished clinically from CJD but was not present in pathologically confirmed Alzheimer disease.
 Detection of this protein by immunoassay promises to provide a much needed premortem diagnostic test for CJD.
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Between 1994 and 1997, 22 cases of a new variant of CJD were reported from England. These cases are suspected of having been caused by consumption of meat products contaminated by BSE. The patients were young people and had prominent psychiatric manifestations and ataxia. The brain showed spongiform encephalopathy and amyloid plaques.
CJD affects one in every million people. Ten to fifteen percent of cases are familial, autosomal dominant. Most familial cases are associated with a mutation at codon 200 of the PrP gene resulting in a Glu to Lys substitution.There are other less common mutations. These mutations presumably cause the PrP protein to misfold spontaneously. Mutations of the PrP gene also cause the Gersmann-Straussler-Scheinker syndrome and fatal familial insomnia.
Over 100 cases of CJD have been caused by injection of growth hormone and gonadotrophin extracted from cadaveric pituitaries. About 80 cases have been transmitted by contaminated dural grafts, corneal transplants and contaminated electrodes . These and the new variant cases from England are the bulk of transmitted cases.
The vast majority of CJD cases are sporadic and apparently spontaneous. The etiology of these cases is unknown. The new variant of CJD from BSE has raised the specter of food contamination as a possible cause but there is no evidence that sporadic CJD is caused by that mechanism. No mutation of the PrP gene has been identified in sporadic CJD. However, the PrP gene shows a polymorphism at codon 129 that can code for either Methionine or Valine. Most patients with sporadic and transmitted CJD are either M/M or V/V homozygotes.
The potential of accidental transmission of a fatal neurological disorder has scared pathologists and other health care workers connected with these diseases. This potential should not be underestimated. However, these fears may be somewhat exaggerated. The disease is transmitted only by invasive methods such as inoculation or injection and not by casual contact such as occurs in the course of routine patient care. An autopsy can be safely done using precautions. Fixation of tissues in formalin does not eliminate transmissibility of CJD and other prion diseases. Additional chemical treatment with phenol or formic acid is needed.
Before prions were known, sporadic CJD and other prion diseases were thought to be "degenerative" diseases. When it was discovered that they can be transmitted, they were reclassified as infectious diseases. At one point, they were called slow virus diseases. However, they are obviously not the same as bacterial or viral infections. For one thing, prions contain no nucleic acid and their chemistry and structure are not like that of bacteria or viruses. They damage neurons directly and do not elicit inflammatory and immune reactions. The familial forms of prion diseases can probably be conceived of as inherited metabolic disorders, not unlike Huntington disease or familial Alzheimer disease.The transmitted and sporadic forms are difficult to understand. How an abnormal protein entering the body crosses the blood-brain barrier and causes its normal counterparts in neurons to change their folding in a chain reaction that eventually destroys the brain, defies molecular explanation. Prions have been compared to the Borg, an alien mechano-anthropoid species in Star Trek, that relentlessly assimilate other species with which they come in contact. Two Nobel prizes have been awarded for research in prion diseases. In 1976, Carleton Gajdusek received the prize for proving that they are transmissible and in 1997 Stanley Prusiner was given the prize for the prion hypothesis.
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